Course disputée sur le circuit de Automotodrom Brno
| Position | Numéro | Pilote | Team | Temps | Tours | Points | Départ |
|---|---|---|---|---|---|---|---|
| 1 | 40 | Nicolas Terol | Bancaja Aspar Team | 43'49.303 | 19 | 25 | 2 |
| 2 | 44 | Pol Espargaro | Tuenti Racing | 44'09.654 | 19 | 20 | 3 |
| 3 | 12 | Esteve Rabat | Blusens-STX | 44'09.858 | 19 | 16 | 12 |
| 4 | 94 | Jonas Folger | Ongetta Team | 44'18.832 | 19 | 13 | 13 |
| 5 | 84 | Jakub Kornfeil | Racing Team Germany | 44'19.217 | 19 | 11 | 14 |
| 6 | 38 | Bradley Smith | Bancaja Aspar Team | 44'19.289 | 19 | 10 | 1 |
| 7 | 93 | Marc Marquez | Red Bull Ajo Motorsport | 44'20.708 | 19 | 9 | 4 |
| 8 | 53 | Jasper Iwema | CBC Corse | 44'22.276 | 19 | 8 | 17 |
| 9 | 71 | Tomoyoshi Koyama | Racing Team Germany | 44'31.145 | 19 | 7 | 8 |
| 10 | 39 | Luis Salom | Stipa-Molenaar Racing GP | 44'35.431 | 19 | 6 | 10 |
| 11 | 26 | Adrian Martin | Aeroport de Castello - Ajo | 44'36.062 | 19 | 5 | 22 |
| 12 | 23 | Alberto Moncayo | Andalucia Cajasol | 44'36.933 | 19 | 4 | 15 |
| 13 | 78 | Marcel Schrotter | Interwetten Honda 125 | 44'39.960 | 19 | 3 | 18 |
| 14 | 69 | Louis Rossi | CBC Corse | 44'40.031 | 19 | 2 | 21 |
| 15 | 63 | Zulfahmi Khairuddin | AirAsia - Sepang Int. Circuit | 44'44.793 | 19 | 1 | 23 |
| 16 | 11 | Sandro Cortese | Avant Mitsubishi Ajo | 44'50.205 | 19 | 0 | 5 |
| 17 | 35 | Randy Krummenacher | Stipa-Molenaar Racing GP | 44'51.677 | 19 | 0 | 7 |
| 18 | 95 | Alessandro Tonucci | Junior GP Racing Team FMI | 45'20.039 | 19 | 0 | 27 |
| 19 | 14 | Johann Zarco | WTR San Marino Team | 45'39.919 | 19 | 0 | 9 |
| 20 | 50 | Sturla Fagerhaug | AirAsia - Sepang Int. Circuit | 45'43.114 | 19 | 0 | 20 |
| 21 | 72 | Marco Ravaioli | Lambretta Reparto Corse | 45'43.722 | 19 | 0 | 28 |
| 22 | 55 | Isaac Vinales | Catalunya Racing Team | 45'44.013 | 19 | 0 | 25 |
| 23 | 87 | Luca Marconi | Ongetta Team | 45'52.555 | 19 | 0 | 29 |
| 24 | 7 | Efren Vazquez | Tuenti Racing | 39'32.248 | 17 | 0 | 6 |
| 25 | 15 | Simone Grotzkyj | Fontana Racing | 31'11.008 | 13 | 0 | 19 |
| 26 | 48 | Ladislav Chmelik | Moto FGR | 27'10.088 | 11 | 0 | 3 |
| 27 | 32 | Lorenzo Savadori | Matteoni CP Racing | 25'17.722 | 10 | 0 | 24 |
| 28 | 92 | Luigi Morciano | Junior GP Racing Team FMI | 19'39.793 | 8 | 0 | 26 |
| 29 | 5 | Alexis Masbou | Ongetta Team | 2'33.022 | 1 | 0 | 16 |
| 30 | 99 | Danny Webb | Andalucia Cajasol | 0 | 0 | 11 |