Course disputée sur le circuit de Automotodrom Brno
| Position | Numéro | Pilote | Team | Temps | Tours | Points | Départ |
|---|---|---|---|---|---|---|---|
| 1 | 46 | Valentino Rossi | Gauloise Yamaha | 43'56.539 | 22 | 25 | 4 |
| 2 | 65 | Loris Capirossi | Ducati Marlboro Team | 43'58.376 | 22 | 20 | 3 |
| 3 | 3 | Max Biaggi | Honda Racing Corporation | 43'59.983 | 22 | 16 | 10 |
| 4 | 4 | Alex Barros | Camel Honda | 44'00.687 | 22 | 13 | 7 |
| 5 | 69 | Nicky Hayden | Repsol Honda Team | 44'00.902 | 22 | 11 | 2 |
| 6 | 33 | Marco Melandri | Honda Gresini | 44'07.689 | 22 | 10 | 5 |
| 7 | 5 | Colin Edwards | Gauloise Yamaha | 44'10.071 | 22 | 9 | 9 |
| 8 | 7 | Carlos Checa | Ducati Marlboro Team | 44'15.870 | 22 | 8 | 6 |
| 9 | 12 | Troy Bayliss | Honda Pons | 44'23.664 | 22 | 7 | 13 |
| 10 | 6 | Makoto Tamada | Konica Minolta Honda | 44'23.787 | 22 | 6 | 12 |
| 11 | 10 | Kenny Jr Roberts | Team Suzuki MotoGP | 44'24.223 | 22 | 5 | 17 |
| 12 | 56 | Shinya Nakano | Kawasaki Racing Team | 44'24.342 | 22 | 4 | 11 |
| 13 | 21 | John Hopkins | Team Suzuki MotoGP | 44'24.817 | 22 | 3 | 8 |
| 14 | 24 | Toni Elias | Fortuna Yamaha MotoGP | 44'25.110 | 22 | 2 | 15 |
| 15 | 66 | Alexander Hofmann | Kawasaki Racing Team | 44'26.307 | 22 | 1 | 14 |
| 16 | 9 | Nobuatsu Aoki | Team Suzuki MotoGP | 44'38.317 | 22 | 0 | 16 |
| 17 | 44 | Roberto Rolfo | Team d\'Antin Pramac | 44'54.339 | 22 | 0 | 19 |
| 18 | 11 | Ruben Xaus | Fortuna Yamaha MotoGP | 45'04.621 | 22 | 0 | 20 |
| 19 | 77 | James Ellison | Blata WCM | 45'38.708 | 22 | 0 | 18 |
| 20 | 27 | Franco Battaini | Blata WCM | 45'51.323 | 22 | 0 | 21 |
| 21 | 15 | Sete Gibernau | Honda Gresini | 41'57.460 | 21 | 0 | 1 |
| 22 | 99 | Jeremy McWilliams | Team Roberts | 14'45.932 | 6 | 0 | 22 |