Course disputée sur le circuit de Automotodrom Brno
| Position | Numéro | Pilote | Team | Temps | Tours | Points | Départ |
|---|---|---|---|---|---|---|---|
| 1 | 46 | Valentino Rossi | Nastro Azzurro Team | 07:17:24 | 22 | 25 | 2 |
| 2 | 28 | Alex Criville | Repsol Ypf Honda Team | 08:13:38 | 22 | 20 | 8 |
| 3 | 65 | Loris Capirossi | West Honda Pons | 08:20:11 | 22 | 16 | 3 |
| 4 | 6 | Norifumi Abe | Antena 3 Yamaha d\'Antin | 08:25:01 | 22 | 13 | 11 |
| 5 | 11 | Tohru Ukawa | Repsol Ypf Honda Team | 09:06:58 | 22 | 11 | 13 |
| 6 | 5 | Garry McCoy | Red Bull Yamaha WCM | 09:19:48 | 22 | 10 | 5 |
| 7 | 7 | Carlos Checa | Marlboro Yamaha Team | 10:15:33 | 22 | 9 | 7 |
| 8 | 15 | Sete Gibernau | Telefonica Movistar Suzuki | 11:30:45 | 22 | 8 | 10 |
| 9 | 4 | Alex Barros | West Honda Pons | 14:09:36 | 22 | 7 | 9 |
| 10 | 3 | Max Biaggi | Marlboro Yamaha Team | 15:33:22 | 22 | 6 | 1 |
| 11 | 41 | Noriyuki Haga | Red Bull Yamaha WCM | 19:08:31 | 22 | 5 | 15 |
| 12 | 19 | Olivier Jacque | Gauloises Yamaha Tech3 | 19:15:07 | 22 | 4 | 12 |
| 13 | 10 | Jose Luis Cardoso | Antena 3 Yamaha d\'Antin | 22:57:56 | 22 | 3 | 14 |
| 14 | 12 | Nobuatsu Aoki | Arie Molenaar Racing | 03:39:19 | 22 | 2 | 17 |
| 15 | 16 | Johan Stigefelt | Sabre Sport | 17:30:44 | 22 | 1 | 19 |
| 16 | 21 | Barry Veneman | Dee Cee Jeans Racing Team | 18:35:09 | 22 | 0 | 21 |
| 17 | 1 | Kenny Jr Roberts | Telefonica Movistar Suzuki | 14:38:09 | 7 | 0 | 6 |
| 18 | 14 | Anthony West | Dee Cee Jeans Racing Team | 18:33:32 | 8 | 0 | 18 |
| 19 | 9 | Leon Haslam | Shell Advance Honda | 02:03:43 | 13 | 0 | 16 |
| 20 | 17 | Jurgen vd Goorbergh | Proton Team KR | 18:26:07 | 14 | 0 | 4 |
| 21 | 25 | Shaun Geronimi | Paton Grand Prix | 18:15:03 | 17 | 0 | 22 |
| 22 | 18 | Brendan Clarke | Shell Advance Honda | 16:00:00 | 17 | 0 | 20 |