Course disputée sur le circuit de Automotodrom Brno
| Position | Numéro | Pilote | Team | Temps | Tours | Points | Départ |
|---|---|---|---|---|---|---|---|
| 1 | 46 | Valentino Rossi | Nastro Azzurro Team | 45'01.044 | 22 | 25 | 2 |
| 2 | 28 | Alex Criville | Repsol Ypf Honda Team | 45'04.418 | 22 | 20 | 8 |
| 3 | 65 | Loris Capirossi | West Honda Pons | 45'04.811 | 22 | 16 | 3 |
| 4 | 6 | Norifumi Abe | Antena 3 Yamaha d\'Antin | 45'05.101 | 22 | 13 | 11 |
| 5 | 11 | Tohru Ukawa | Repsol Ypf Honda Team | 45'07.618 | 22 | 11 | 13 |
| 6 | 5 | Garry McCoy | Red Bull Yamaha WCM | 45'08.388 | 22 | 10 | 5 |
| 7 | 7 | Carlos Checa | Marlboro Yamaha Team | 45'11.733 | 22 | 9 | 7 |
| 8 | 15 | Sete Gibernau | Telefonica Movistar Suzuki | 45'16.245 | 22 | 8 | 10 |
| 9 | 4 | Alex Barros | West Honda Pons | 45'25.776 | 22 | 7 | 9 |
| 10 | 3 | Max Biaggi | Marlboro Yamaha Team | 45'30.802 | 22 | 6 | 1 |
| 11 | 41 | Noriyuki Haga | Red Bull Yamaha WCM | 45'43.711 | 22 | 5 | 15 |
| 12 | 19 | Olivier Jacque | Gauloises Yamaha Tech3 | 45'44.107 | 22 | 4 | 12 |
| 13 | 10 | Jose Luis Cardoso | Antena 3 Yamaha d\'Antin | 45'57.476 | 22 | 3 | 14 |
| 14 | 12 | Nobuatsu Aoki | Arie Molenaar Racing | 46'14.359 | 22 | 2 | 17 |
| 15 | 16 | Johan Stigefelt | Sabre Sport | 47'04.244 | 22 | 1 | 19 |
| 16 | 21 | Barry Veneman | Dee Cee Jeans Racing Team | 47'08.109 | 22 | 0 | 21 |
| 17 | 1 | Kenny Jr Roberts | Telefonica Movistar Suzuki | 31'03.489 | 7 | 0 | 6 |
| 18 | 14 | Anthony West | Dee Cee Jeans Racing Team | 29'51.212 | 8 | 0 | 18 |
| 19 | 9 | Leon Haslam | Shell Advance Honda | 18'47.023 | 13 | 0 | 16 |
| 20 | 17 | Jurgen vd Goorbergh | Proton Team KR | 16'53.167 | 14 | 0 | 4 |
| 21 | 25 | Shaun Geronimi | Paton Grand Prix | 11'06.903 | 17 | 0 | 22 |
| 22 | 18 | Brendan Clarke | Shell Advance Honda | 10'58.800 | 17 | 0 | 20 |