Course disputée sur le circuit de Twin Ring Motegi
| Position | Numéro | Pilote | Team | Temps | Tours | Points | Départ |
|---|---|---|---|---|---|---|---|
| 1 | 93 | Marc Marquez | Team CatalunyaCaixa Repsol | 20:36:11 | 23 | 25 | 2 |
| 2 | 40 | Pol Espargaro | Pons 40 HP Tuenti | 20:43:06 | 23 | 20 | 1 |
| 3 | 80 | Esteve Rabat | Pons 40 HP Tuenti | 23:15:55 | 23 | 16 | 3 |
| 4 | 45 | Scott Redding | Marc VDS Racing Team | 23:40:40 | 23 | 13 | 4 |
| 5 | 12 | Thomas Luthi | Interwetten Honda MotoGP | 23:49:26 | 23 | 11 | 5 |
| 6 | 3 | Simone Corsi | JIR Moto2 | 01:42:34 | 23 | 10 | 12 |
| 7 | 30 | Takaaki Nakagami | Italtrans S.T.R. | 01:47:23 | 23 | 9 | 11 |
| 8 | 5 | Johann Zarco | JIR Moto2 | 04:26:37 | 23 | 8 | 6 |
| 9 | 49 | Alex Pons | Pons 40 HP Tuenti | 04:30:22 | 23 | 7 | 13 |
| 10 | 77 | Dominique Aegerter | Technomag-CIP | 04:32:50 | 23 | 6 | 19 |
| 11 | 60 | Julian Simon | Blusens Avintia | 04:39:02 | 23 | 5 | 8 |
| 12 | 81 | Jordi Torres | Tech 3 Racing | 04:53:06 | 23 | 4 | 16 |
| 13 | 19 | Xavier Simeon | Tech 3 Racing | 07:39:14 | 23 | 3 | 22 |
| 14 | 63 | Mike Di Meglio | S/Master Speed Up | 07:40:39 | 23 | 2 | 23 |
| 15 | 72 | Yuki Takahashi | NGM Mobile Forward Racing | 07:42:21 | 23 | 1 | 14 |
| 16 | 36 | Mika Kallio | Marc VDS Racing Team | 07:55:34 | 23 | 0 | 15 |
| 17 | 29 | Andrea Iannone | Speed Master | 07:57:51 | 23 | 0 | 18 |
| 18 | 18 | Nicolas Terol | Mapfre Aspar Team | 08:55:50 | 23 | 0 | 9 |
| 19 | 15 | Alex De Angelis | NGM Mobile Forward Racing | 09:31:18 | 23 | 0 | 17 |
| 20 | 14 | Ratthapark Wilairot | Thai Honda Gresini Moto2 | 12:02:12 | 23 | 0 | 25 |
| 21 | 88 | Ricard Cardus | Arguinano Racing Team | 12:06:26 | 23 | 0 | 21 |
| 22 | 75 | Tomoyoshi Koyama | Technomag-CIP | 12:10:22 | 23 | 0 | 27 |
| 23 | 23 | Marcel Schrotter | Desguaces La Torre SAG | 12:17:43 | 23 | 0 | 24 |
| 24 | 8 | Gino Rea | Federal Oil Gresini Moto2 | 12:49:48 | 23 | 0 | 28 |
| 25 | 22 | Alessandro Andreozzi | Andreozzi Reparto Corse | 16:42:49 | 23 | 0 | 26 |
| 26 | 82 | Elena Rosell | QMMF Racing Team | 00:20:12 | 23 | 0 | 31 |
| 27 | 57 | Eric Granado | JIR Moto2 | 00:35:58 | 23 | 0 | 32 |
| 28 | 20 | Jesko Raffin | GP Team Switzerland | 21:37:19 | 22 | 0 | 30 |
| 29 | 24 | Toni Elias | Mapfre Aspar Team | 19:06:12 | 19 | 0 | 10 |
| 30 | 38 | Bradley Smith | Tech 3 Racing | 01:17:43 | 3 | 0 | 7 |
| 31 | 95 | Anthony West | QMMF Racing Team | 01:00:00 | 0 | 0 | 20 |
| 32 | 31 | Kotha Nozane | SAG Team | 01:00:00 | 0 | 0 | 29 |